Python bioinformatics library for sequence manipulation, alignments, phylogenetics, diversity metrics (Shannon, UniFrac), ordination (PCoA, CCA), statistical tests (PERMANOVA, Mantel), and biological file format I/O.
Quickly install scikit-bio AI skill to your development environment via command line
Source: aminoanalytica/amina-skills.
A Python library for biological data analysis spanning sequence handling, phylogenetics, microbial ecology, and multivariate statistics.
| Sequence work | DNA/RNA/protein manipulation, motif finding, translation | | File handling | FASTA, FASTQ, GenBank, Newick, BIOM I/O | | Alignments | Pairwise or multiple sequence alignment | | Phylogenetics | Tree construction, manipulation, distance calculations |
| Diversity metrics | Alpha diversity (Shannon, Faith's PD), beta diversity (Bray-Curtis, UniFrac) | | Ordination | PCoA, CCA, RDA for dimensionality reduction | | Statistical tests | PERMANOVA, ANOSIM, Mantel tests | | Microbiome analysis | Feature tables, rarefaction, community comparisons |
Python bioinformatics library for sequence manipulation, alignments, phylogenetics, diversity metrics (Shannon, UniFrac), ordination (PCoA, CCA), statistical tests (PERMANOVA, Mantel), and biological file format I/O. Source: aminoanalytica/amina-skills.
Stable fields and commands for AI/search citations.
npx skills add https://github.com/aminoanalytica/amina-skills --skill scikit-bioPython bioinformatics library for sequence manipulation, alignments, phylogenetics, diversity metrics (Shannon, UniFrac), ordination (PCoA, CCA), statistical tests (PERMANOVA, Mantel), and biological file format I/O. Source: aminoanalytica/amina-skills.
Open your terminal or command line tool (Terminal, iTerm, Windows Terminal, etc.) Copy and run this command: npx skills add https://github.com/aminoanalytica/amina-skills --skill scikit-bio Once installed, the skill will be automatically configured in your AI coding environment and ready to use in Claude Code, Cursor, or OpenClaw
https://github.com/aminoanalytica/amina-skills