Python toolkit for computational biology. Use when asked to "parse FASTA", "read GenBank", "query NCBI", "run BLAST", "analyze protein structure", "build phylogenetic tree", or work with biological sequences. Handles sequence I/O, database access, alignments, structure analysis, and phylogenetics.
Quickly install biopython AI skill to your development environment via command line
Source: aminoanalytica/amina-skills.
Biopython (v1.85+) delivers a comprehensive Python library for biological data analysis. It requires Python 3 and NumPy, providing modular components for sequences, alignments, database access, BLAST, structures, and phylogenetics.
| Sequence Operations | Create, modify, translate DNA/RNA/protein sequences | | File Format Handling | Parse or convert FASTA, GenBank, FASTQ, PDB, mmCIF | | NCBI Database Access | Query GenBank, PubMed, Protein, Gene, Taxonomy | | Similarity Searches | Execute BLAST locally or via NCBI, parse results |
| Alignment Work | Pairwise or multiple sequence alignments | | Structural Analysis | Parse PDB files, compute distances, DSSP assignment | | Tree Construction | Build, manipulate, visualize phylogenetic trees | | Motif Discovery | Find and score sequence patterns | | Sequence Statistics | GC content, molecular weight, melting temperature |
Stable fields and commands for AI/search citations.
npx skills add https://github.com/aminoanalytica/amina-skills --skill biopythonPython toolkit for computational biology. Use when asked to "parse FASTA", "read GenBank", "query NCBI", "run BLAST", "analyze protein structure", "build phylogenetic tree", or work with biological sequences. Handles sequence I/O, database access, alignments, structure analysis, and phylogenetics. Source: aminoanalytica/amina-skills.
Open your terminal or command line tool (Terminal, iTerm, Windows Terminal, etc.) Copy and run this command: npx skills add https://github.com/aminoanalytica/amina-skills --skill biopython Once installed, the skill will be automatically configured in your AI coding environment and ready to use in Claude Code, Cursor, or OpenClaw
https://github.com/aminoanalytica/amina-skills