·tooluniverse-protein-therapeutic-design
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tooluniverse-protein-therapeutic-design

mims-harvard/tooluniverse

Design novel protein therapeutics (binders, enzymes, scaffolds) using AI-guided de novo design. Uses RFdiffusion for backbone generation, ProteinMPNN for sequence design, ESMFold/AlphaFold2 for validation. Use when asked to design protein binders, therapeutic proteins, or engineer protein function.

26Installs·4Trend·@mims-harvard

Installation

$npx skills add https://github.com/mims-harvard/tooluniverse --skill tooluniverse-protein-therapeutic-design

SKILL.md

AI-guided de novo protein design using RFdiffusion backbone generation, ProteinMPNN sequence optimization, and structure validation for therapeutic protein development.

| NvidiaNIMrfdiffusion | Backbone generation | Yes | | NvidiaNIMproteinmpnn | Sequence design | Yes | | NvidiaNIMesmfold | Fast structure validation | Yes | | NvidiaNIMalphafold2 | High-accuracy validation | Yes | | NvidiaNIMesm2650m | Sequence embeddings | Yes |

| NvidiaNIMrfdiffusion | numsteps | diffusionsteps | | NvidiaNIMproteinmpnn | pdb | pdbstring | | NvidiaNIMesmfold | seq | sequence |

Design novel protein therapeutics (binders, enzymes, scaffolds) using AI-guided de novo design. Uses RFdiffusion for backbone generation, ProteinMPNN for sequence design, ESMFold/AlphaFold2 for validation. Use when asked to design protein binders, therapeutic proteins, or engineer protein function. Source: mims-harvard/tooluniverse.

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Stable fields and commands for AI/search citations.

Install command
npx skills add https://github.com/mims-harvard/tooluniverse --skill tooluniverse-protein-therapeutic-design
Category
</>Dev Tools
Verified
First Seen
2026-02-11
Updated
2026-02-18

Quick answers

What is tooluniverse-protein-therapeutic-design?

Design novel protein therapeutics (binders, enzymes, scaffolds) using AI-guided de novo design. Uses RFdiffusion for backbone generation, ProteinMPNN for sequence design, ESMFold/AlphaFold2 for validation. Use when asked to design protein binders, therapeutic proteins, or engineer protein function. Source: mims-harvard/tooluniverse.

How do I install tooluniverse-protein-therapeutic-design?

Open your terminal or command line tool (Terminal, iTerm, Windows Terminal, etc.) Copy and run this command: npx skills add https://github.com/mims-harvard/tooluniverse --skill tooluniverse-protein-therapeutic-design Once installed, the skill will be automatically configured in your AI coding environment and ready to use in Claude Code or Cursor

Where is the source repository?

https://github.com/mims-harvard/tooluniverse