What is bio-prefect-dask-nextflow?
Design and scaffold bioinformatics pipelines using Prefect+Dask for local/distributed execution or Nextflow for HPC schedulers. Source: fmschulz/omics-skills.
·bio-prefect-dask-nextflow
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bio-prefect-dask-nextflow
✓Design and scaffold bioinformatics pipelines using Prefect+Dask for local/distributed execution or Nextflow for HPC schedulers.
Installation
How to Install bio-prefect-dask-nextflow
Quickly install bio-prefect-dask-nextflow AI skill to your development environment via command line
- Open Terminal: Open your terminal or command line tool (Terminal, iTerm, Windows Terminal, etc.)
- Run Installation Command: Copy and run this command: npx skills add https://github.com/fmschulz/omics-skills --skill bio-prefect-dask-nextflow
- Verify Installation: Once installed, the skill will be automatically configured in your AI coding environment and ready to use in Claude Code, Cursor, or OpenClaw
Source: fmschulz/omics-skills.
SKILL.md
View rawChoose and scaffold the right workflow engine for local, distributed, or HPC bioinformatics pipelines.
| Engine choice | See decision-matrix.md | | Prefect+Dask scaffold | See prefect-dask.md | | Prefect on Slurm | See prefect-hpc-slurm.md | | Nextflow on HPC | See nextflow-hpc.md | | Examples | See examples.md |
Issue: Workflow fails on HPC due to environment mismatch Solution: Pin container/conda versions and validate with a minimal test dataset.
Design and scaffold bioinformatics pipelines using Prefect+Dask for local/distributed execution or Nextflow for HPC schedulers. Source: fmschulz/omics-skills.
Facts (cite-ready)
Stable fields and commands for AI/search citations.
- Install command
npx skills add https://github.com/fmschulz/omics-skills --skill bio-prefect-dask-nextflow- Source
- fmschulz/omics-skills
- Category
- </>Dev Tools
- Verified
- ✓
- First Seen
- 2026-02-26
- Updated
- 2026-03-10
Quick answers
How do I install bio-prefect-dask-nextflow?
Open your terminal or command line tool (Terminal, iTerm, Windows Terminal, etc.) Copy and run this command: npx skills add https://github.com/fmschulz/omics-skills --skill bio-prefect-dask-nextflow Once installed, the skill will be automatically configured in your AI coding environment and ready to use in Claude Code, Cursor, or OpenClaw
Where is the source repository?
https://github.com/fmschulz/omics-skills
Details
- Category
- </>Dev Tools
- Source
- skills.sh
- First Seen
- 2026-02-26