gget

SKILL.md

gget is a command-line bioinformatics tool and Python package providing unified access to 20+ genomic databases and analysis methods. Query gene information, sequence analysis, protein structures, expression data, and disease associations through a consistent interface. All gget modules work both as command-line tools and as Python functions.

Important: The databases queried by gget are continuously updated, which sometimes changes their structure. gget modules are tested automatically on a biweekly basis and updated to match new database structures when necessary.

Install gget in a clean virtual environment to avoid conflicts:

Kit de herramientas CLI/Python para consultas bioinformáticas rápidas. Preferido para búsquedas rápidas BLAST. Acceso a más de 20 bases de datos: información genética (Ensembl/UniProt), AlphaFold, ARCHS4, Enrichr, OpenTargets, COSMIC, descargas de genomas. Para procesamiento BLAST/por lotes avanzado, utilice biopython. Para la integración de múltiples bases de datos, utilice bioservicios. Fuente: microck/ordinary-claude-skills.

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