·fmri preprocessing pipeline guide
</>

fmri preprocessing pipeline guide

Domain-validated guidance for fMRI preprocessing decisions: motion correction, slice timing, spatial normalization, smoothing, confound regression, and quality control

10Installs·1Trend·@haoxuanlithuai

Installation

$npx skills add https://github.com/haoxuanlithuai/awesome_cognitive_and_neuroscience_skills --skill fmri preprocessing pipeline guide

How to Install fmri preprocessing pipeline guide

Quickly install fmri preprocessing pipeline guide AI skill to your development environment via command line

  1. Open Terminal: Open your terminal or command line tool (Terminal, iTerm, Windows Terminal, etc.)
  2. Run Installation Command: Copy and run this command: npx skills add https://github.com/haoxuanlithuai/awesome_cognitive_and_neuroscience_skills --skill fmri preprocessing pipeline guide
  3. Verify Installation: Once installed, the skill will be automatically configured in your AI coding environment and ready to use in Claude Code, Cursor, or OpenClaw

Source: haoxuanlithuai/awesome_cognitive_and_neuroscience_skills.

SKILL.md

View raw

fMRI preprocessing transforms raw scanner data into a form suitable for statistical analysis. Unlike generic data cleaning, every preprocessing decision in fMRI involves domain-specific trade-offs: choosing the wrong step order can introduce artifacts that mimic neural signal, smoothing at the wrong scale destroys the spatial information needed for multivariate analyses, and failing to correct for susceptibility d...

A competent programmer without neuroimaging training would get many of these decisions wrong. This skill encodes the domain knowledge required to make correct preprocessing choices for different analysis goals.

This skill was generated by AI from academic literature. All parameters, thresholds, and citations require independent verification before use in research. If you find errors, please open an issue.

Domain-validated guidance for fMRI preprocessing decisions: motion correction, slice timing, spatial normalization, smoothing, confound regression, and quality control Source: haoxuanlithuai/awesome_cognitive_and_neuroscience_skills.

Facts (cite-ready)

Stable fields and commands for AI/search citations.

Install command
npx skills add https://github.com/haoxuanlithuai/awesome_cognitive_and_neuroscience_skills --skill fmri preprocessing pipeline guide
Category
</>Dev Tools
Verified
First Seen
2026-03-10
Updated
2026-03-11

Browse more skills from haoxuanlithuai/awesome_cognitive_and_neuroscience_skills

Quick answers

What is fmri preprocessing pipeline guide?

Domain-validated guidance for fMRI preprocessing decisions: motion correction, slice timing, spatial normalization, smoothing, confound regression, and quality control Source: haoxuanlithuai/awesome_cognitive_and_neuroscience_skills.

How do I install fmri preprocessing pipeline guide?

Open your terminal or command line tool (Terminal, iTerm, Windows Terminal, etc.) Copy and run this command: npx skills add https://github.com/haoxuanlithuai/awesome_cognitive_and_neuroscience_skills --skill fmri preprocessing pipeline guide Once installed, the skill will be automatically configured in your AI coding environment and ready to use in Claude Code, Cursor, or OpenClaw

Where is the source repository?

https://github.com/haoxuanlithuai/awesome_cognitive_and_neuroscience_skills